Metrics Remixed: The Times They Are a Webby

Altmetrics Correlations: We need to think about n-dimensional impact space, taken from a slide presentation by Jason Priem

“See the mind at work and see the mind in work…”
(from REMIXTHEBOOK review)

“Until quite recently the complete justification for even the most complex scientific facts could be understood by a single person,” Michael Nielsen reminds us before describing science today as graspable beyond individual understanding. If one person can no longer understand the ways of science, then, perhaps, “a group of people” may “collectively claim to understand all the separate pieces that go into the discovery, and how those pieces fit together.”

How do we correlate members of this group, are some members closer to each other, how can they collectively claim what they collectively communicate, and what pieces hold them together? This is what the altmetrics group tries to explore, and teaches the machine to seek. This is what “changes the game”, and the reason why we came to play has recently been interpreted by Jason Priem, a PhD student, whose work is focused on improving scholarly communication.

Communicating is Doing the Science

In a speech presented at the Purdue university, Jason aims at deciphering what is crucial for the Second scientific Revolution; that is, altmetrics, rediscovering impact, and decoupling of the journals. “Communicating is the doing of science,” he quotes Montgomery. The “conversation,” he continues, “is arguably the most important work we do in science,” added to it that it is easier than ever to make it visible – we have ways of publishing and growing it in patterns, through social networks, reference managers, blogs, social bookmarking systems.

At Research Remix altmetrics group, they claim: “By analyzing patterns in what people are reading, bookmarking, sharing, discussing, and citing online we can figure out what kind – what flavor – of impact a research output is making.” As opposed to what we would expect, “the goal isn’t to compare flavors: one flavor isn’t objectively better than another. They each have to be appreciated on their own merits for the needs they meet.”

To Each His Flavor

Priem mentions the example of Twitter feeds that solely accumulated to over 58k citations from Twitter to scholarly articles in just one month, that is, a certain dataset listed 58k tweets that mentioned a scientific article (broadly speaking anything with a DOI, PMID or arxiv ID) between the 1st and 31st of July 2011.

Recently, an altmetrics bookmarklet was launched, that you can easily add to your browser toolbar, that will “on the push of a button” count the number of Tweet mentions, mentions on Facebook, CiteULike, Connotea or Mendeley for any article, again, with DOI, PMID or arxiv ID.

Altmetrics Bookmark to add to your Toolbar

“The local genomics dataset has moved to an online repository, and now, we can track it,” it is written in Altmetrics Manifesto. “Altmetrics are fast, using public APIs to gather data in days or weeks. They’re open–not just the data, but the scripts and algorithms that collect and interpret it. Altmetrics look beyond counting and emphasize semantic content like usernames, timestamps, and tags. Altmetrics aren’t citations, nor are they webometrics.”

“Now we can listen in,” the manifesto reminds us. “In growing numbers, scholars are moving their everyday work to the web. Online reference managers Zotero and Mendeley each claim to store over 40 million articles (making them substantially larger than PubMed); as many as a third of scholars are on Twitter, and a growing number tend scholarly blogs.”

Altmetrics are not limited to one type of person – academics, one kind of resource – scholarly article, and one kind of use – using to support a scholarly article, and while, in words of Jason Priem, “we started to confuse “the kind of use we can track” with use, and “citation impact” with impact,” we still struggle to mine the first scholarly web, instead of mining “the next one.” Even worse, our system is “the best scholarly communication system possible using the 17th century technology.”

Time to Listen In

With altmetrics, we can crowdsource peer-review; taken from Altmetrics Manifesto

Jennifer Howard writes for the Chronicle: “Peer review has served scholarship well but has become slow and unwieldy and rewards conventional thinking. Citation-counting measures such as the h-index take too long to accumulate. And the impact factor of journals gets misapplied as a way to assess an individual researcher’s performance, which it wasn’t designed to do.”

Priem explains how looking into the next web will be done from a different angle: “Altmetrics impact is mostly orthogonal to traditional citation impact. We need to think about n-dimensional “impact space”, articles that fit into clusters by type of uses. Altmetrics can provide rich metadata, not just counts.”

Some of the tools that are already available (bearing in mind that altmetrics are in their early developing phase) were presented by Priem:

  • PLoS Article-level metrics
  • CitedIn
  • ReaderMeter
  • altmetric.com
  • ScienceCard
  • Total-impact

Priem concludes the first part: “Quantifying impact means we can teach machines what’s important. This changes the game, and the game needs to be changed.”

Decoupling Journals

The next thing Priem discusses is the decoupling of the journals. At this point, we may ask ourselves what highly relevant research result today really – is. Is it scholarly article, or rather a separate piece of information?

“First journals went hand in hand with the Scientific Revolution and applied the most advanced technology available to the problem of spreading scholarship at the time,” Priem suggests. In fact, all scientific progress is limited to the best technology available and, if this was once printing press, today it is the technology of the world wide web.

As a consequence, the current system has problems, it is “slow, restrictive in format, closed, inconsistent and hard to innovate on”. The new system, will however, need to do all that current system does, only better. It will need to connect all members through a “live CV” that shows altmetrics, and this, according to Priem, has already started, given the examples of:

The most compelling among Priem’s conclusions is that “once we have alt-citation data, it’s too useful to ignore” and “alternative filters and even certification paths based on this data will open.” He even borrows a theater reference from Peter Winkler, related to citation graph data: “It is like Chekhov’s gun: once on stage, it has to be fired.” Finally, Priem suggests, “new revolution will not be about homogeneity but about diversity of outputs and this is easier to do on the web then between covers.”

Find the entire video presentation by Jason Priem here.

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Bring Your Cups: 34 New Open Access Books

Feeling thirsty for knowledge, lately? If you would only bring your cup, we will make it brim with knowledge. Browse through our newest collection of 34 new open access books, and remember, no matter how much you carry out, we still have plenty left for everyone, anywhere in the world.

Current Directions in ADHD and Its Treatment

Current Directions in ADHD and Its Treatment

Insecticides - Pest Engineering

Insecticides - Pest Engineering

Contemporary Trends in ADHD Research

Contemporary Trends in ADHD Research

Neural Stem Cells and Therapy

Neural Stem Cells and Therapy

Advances in Quantum Theory

Advances in Quantum Theory

Quantum Gravity

Quantum Gravity

Advances in Photosynthesis - Fundamental Aspects

Advances in Photosynthesis - Fundamental Aspects

Carcinogenesis, Diagnosis, and Molecular Targeted Treatment for Nasopharyngeal Carcinoma

Carcinogenesis, Diagnosis, and Molecular Targeted Treatment for Nasopharyngeal Carcinoma

Huntington's Disease - Core Concepts and Current Advances

Huntington

Understanding Tuberculosis - Global Experiences and Innovative Approaches to the Diagnosis

Understanding Tuberculosis - Global Experiences and Innovative Approaches to the Diagnosis

Ovarian Cancer - Clinical and Therapeutic Perspectives

Ovarian Cancer - Clinical and Therapeutic Perspectives

Understanding Tuberculosis - New Approaches to Fighting Against Drug Resistance

Understanding Tuberculosis - New Approaches to Fighting Against Drug Resistance

Latest Findings in Intellectual and Developmental Disabilities Research

Latest Findings in Intellectual and Developmental Disabilities Research

Topics in Thoracic Surgery

Topics in Thoracic Surgery

Chronic Pancreatitis

Chronic Pancreatitis

Liver Transplantation - Basic Issues

Liver Transplantation - Basic Issues

Solar Power

Solar Power

 An International Perspective on the Future of Research in Chronic Fatigue Syndrome

An International Perspective on the Future of Research in Chronic Fatigue Syndrome

Psoriasis

Psoriasis

Cardiomyopathies - From Basic Research to Clinical Management

Cardiomyopathies - From Basic Research to Clinical Management

Chemical Biology

Chemical Biology

Lyme Disease

Lyme Disease

Advanced Topics in Multimedia Research

Advanced Topics in Multimedia Research

An International Perspective on Topics in Sports Medicine and Sports Injury

An International Perspective on Topics in Sports Medicine and Sports Injury

Solid State Laser

Solid State Laser

Neuroimaging - Methods

Neuroimaging - Methods

Understanding Tuberculosis - Deciphering the Secret Life of the Bacilli

Understanding Tuberculosis - Deciphering the Secret Life of the Bacilli

Tumor Angiogenesis

Tumor Angiogenesis

A New Look at Hypothyroidism

A New Look at Hypothyroidism

Colorectal Cancer - From Prevention to Patient Care

Colorectal Cancer - From Prevention to Patient Care

Advanced Topics in Biomineralization

Advanced Topics in Biomineralization

E-Learning-Organizational Infrastructure and Tools for Specific Areas

E-Learning-Organizational Infrastructure and Tools for Specific Areas

Ovarian Cancer - Basic Science Perspective

Ovarian Cancer - Basic Science Perspective

Innovations in Biotechnology

Innovations in Biotechnology

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Open Access on a String – Cut It and It Will Grow Back

From Sinfest comic titled "Yarny" by Tatsuya Ishida - click to link

The Federal Research Public Access Act was introduced to the White House on February, 9 by representatives Doyle, Yoder, and and Lacy Clay. Exactly what Research Works Act wanted to prohibit, the FRPAA would require, or the open access policies that RWA aimed to eliminate, FRPAA would expand on.

The Yarn

As clearly stated in the full text of the proposed Act (FRPAA):

(1) the Federal Government funds basic and applied research with the expectation that new ideas and discoveries that result from the research, if shared and effectively disseminated, will advance science and improve the lives and welfare of people of the United States and around the world; and
(2) the Internet makes it possible for this information to be promptly available to every scientist, physician, educator, and citizen at home, in school, or in a library.

Basically, FRPAA would make free online public access to publicly funded research mandatory. However, not to be confused with policies such as NIH, the FRPAA wouldn’t specify the OA repository in which authors must deposit their manuscripts, the way the NIH specifies PubMed Central, and it mandates deposits in OA repositories, not submission to OA journals, and as such it focuses on green Open Access and does not provide funds for publication fees at fee-based OA journals (it ignores the Gold OA). FRPAA applies to the version approved by peer review but not yet copy-edited and it permits embargoes up to six months. Finally, it does not tell any kind of journals what their access policies or business models ought to be, it regulates grantees, not publishers. All these reminders about the past experience of the introduction of a similar bill, are explained through Harvard Open Access Project page, managed by Peter Suber.

Irreversibility

Kakaes writes for the Slate magazine on how proposing a bill that would oppose such practice, as Research Works Act does, that would actually prohibit making publicly funded research publicly accessible, is about playing “the shell game, the oldest one in politics: an attempt to pass off the parochial interest of the few (journal publishers) as a broader societal benefit.” He further comments on Elsevier’s act of backing up the Research Works Act: “Elsevier and other commercial publishers have an incentive to encourage the publication of as many papers as possible, regardless of the quality. In a statement, Elsevier says laws like FRPAA could undermine the sustainability of the peer-review publishing system. These claims are easily mocked.” Kakaes finally concludes optimistically: “the movement toward open publishing now seems irreversible,” regardless of whether the FRPAA is passed, or not.

Most string tricks revolve around the same premise: The magician will appear to cut the string into two pieces and then somehow put them back together as one. As with most magic tricks, the secret lies in the preparation before the performance along with some sleight of hand.

It may seem that we have unfolded that old desire of string theorists who made up the mailing system for themselves that finally became an archive (arXiv), which “was a way for the theorists to communicate with one another,” as Kakaes reminds us, and expanded it to a desire to make this research results promptly available, as FRPAA clearly states (see above). Since arXiv, we have seen PubMed, its offspring, flourish.  In addition, universities such as Harvard or MIT are adopting OA policies. It seems only logical for this “open organism” to breed, and for us, to pull this string until it is long enough to see before us all of its elements stretched – until all federally funded research is available to all who could benefit from it, and not only in specific fields. If they’ve tried to cut it, it is no wonder that the string will be put back in one piece, like in that old magic trick where secretly, it is held in a loop.

Further Action

“Open access legislation like FRPAA doesn’t just happen in a vacuum,” Michael Nielsen reminds us. “The Alliance for Taxpayer Access (ATA) is a Washington D.C.-based advocacy group that works to promote open access policies within the US Government.” Find your way to support them, here.

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Open Access – Sending You Love Letters since 2002

Thanks to Design Team at InTech Open Access Publisher.

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Sponge this Up, It is Possible That we Sprang from Sponges: 30 New Open Access Books

Yes, the sponge may be our earliest ancestor, but we have evolved quite since, and we have started to write science, and then we have evolved some more and started making this science open access. Please find time to absorb the following book chapters. They are absolutely free to read, share, download and take under water.

Mechanisms in Parkinson's Disease - Models and Treatments

Mechanisms in Parkinson

Positron Emission Tomography - Current Clinical and Research Aspects

Positron Emission Tomography - Current Clinical and Research Aspects

Sex Hormones

Sex Hormones

Intraepithelial Neoplasia

Intraepithelial Neoplasia

Earthquake Research and Analysis - Seismology, Seismotectonic and Earthquake Geology

Earthquake Research and Analysis - Seismology, Seismotectonic and Earthquake Geology

Hypothyroidism - Influences and Treatments

Hypothyroidism - Influences and Treatments

Organ Donation and Transplantation - Public Policy and Clinical Perspectives

Organ Donation and Transplantation - Public Policy and Clinical Perspectives

Neuroblastoma - Present and Future

Neuroblastoma - Present and Future

Insecticides - Basic and Other Applications

Insecticides - Basic and Other Applications

Selected Topics in Optical Coherence Tomography

Selected Topics in Optical Coherence Tomography

Nuclear Reactors

Nuclear Reactors

Osteogenesis

Osteogenesis

Pituitary Adenomas

Pituitary Adenomas

Cholestasis

Cholestasis

Infrared Radiation

Infrared Radiation

E-Business - Applications and Global Acceptance

E-Business - Applications and Global Acceptance

Chronic Lymphocytic Leukemia

Chronic Lymphocytic Leukemia

Inflammatory Diseases - Immunopathology, Clinical and Pharmacological Bases

Inflammatory Diseases - Immunopathology, Clinical and Pharmacological Bases

Proteomics - Human Diseases and Protein Functions

Proteomics - Human Diseases and Protein Functions

Contemporary and Innovative Practice in Palliative Care

Contemporary and Innovative Practice in Palliative Care

Chronic Kidney Disease and Renal Transplantation

Chronic Kidney Disease and Renal Transplantation

Toxicity and Drug Testing

Toxicity and Drug Testing

Cardiac Transplantation

Cardiac Transplantation

Severe Sepsis and Septic Shock - Understanding a Serious Killer

Severe Sepsis and Septic Shock - Understanding a Serious Killer

Liver Transplantation - Technical Issues and Complications

Liver Transplantation - Technical Issues and Complications

Hepatocellular Carcinoma - Basic Research

Hepatocellular Carcinoma - Basic Research

Advances in Geotechnical Earthquake Engineering - Soil Liquefaction and Seismic Safety of Dams and Monuments

Advances in Geotechnical Earthquake Engineering - Soil Liquefaction and Seismic Safety of Dams and Monuments

Colorectal Cancer Biology - From Genes to Tumor

Colorectal Cancer Biology - From Genes to Tumor

Metabolomics

Metabolomics

Hydrogeology - A Global Perspective

Hydrogeology - A Global Perspective

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Site Offline: Please Enjoy a Cup of Tea

Due to an overwhelming amount of visits to our official website, our servers have been temporarily taken offline. We are in the middle of upgrading them, and the site should be back up soon.

Please have patience during this outage. Our whole team apologizes for this inconvenience.

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We Don’t like Mondays But We Do Love Our New 42 Specialised Books

As much as Mondays are tough and new challenges arise for us to keep up the hard work, we have 42 brand new publications just published online for you to browse through, read, share and download, all free of charge and with no subscription required.

Our main scope is to research, discover, collaborate with authors, and finally publish the best of scientific developments and studies in many scientific subjects. By working to both advance authors’ careers and disseminate knowledge for free, we strive to serve science and the public at our best. Enjoy Free reading.

Intravascular Ultrasound

Intravascular Ultrasound

Neoadjuvant Chemotherapy - Current Applications in Clinical Practice

Neoadjuvant Chemotherapy - Current Applications in Clinical Practice

Bioethanol

Bioethanol

An Introduction to the Study of Mineralogy

An Introduction to the Study of Mineralogy

Noble Metals

Noble Metals

Bioluminescence - Recent Advances in Oceanic Measurements and Laboratory Applications

Bioluminescence - Recent Advances in Oceanic Measurements and Laboratory Applications

Business Intelligence - Solution for Business Development

Business Intelligence - Solution for Business Development

Emotional Intelligence - New Perspectives and Applications

Emotional Intelligence - New Perspectives and Applications

Bladder Cancer - From Basic Science to Robotic Surgery

Bladder Cancer - From Basic Science to Robotic Surgery

X-Ray Spectroscopy

X-Ray Spectroscopy

Scientific, Health and Social Aspects of the Food Industry

Scientific, Health and Social Aspects of the Food Industry

Olive Oil - Constituents, Quality, Health Properties and Bioconversions

Olive Oil - Constituents, Quality, Health Properties and Bioconversions

Advances in Laparoscopic Surgery

Advances in Laparoscopic Surgery

Optical Fiber Communications and Devices

Optical Fiber Communications and Devices

Advances in Brain Imaging

Advances in Brain Imaging

Respiratory Diseases

Respiratory Diseases

Management of Organic Waste

Management of Organic Waste

Advances in Quantum Field Theory

Advances in Quantum Field Theory

Robotic Systems - Applications, Control and Programming

Robotic Systems - Applications, Control and Programming

Tumor Suppressor Genes

Tumor Suppressor Genes

International Perspectives on Global Environmental Change

International Perspectives on Global Environmental Change

Mesotheliomas - Synonyms and Definition, Epidemiology, Etiology, Pathogenesis, Cyto-Histopathological Features, Clinic, Diagnosis, Treatment, Prognosis

Mesotheliomas - Synonyms and Definition, Epidemiology, Etiology, Pathogenesis, Cyto-Histopathological Features, Clinic, Diagnosis, Treatment, Prognosis

Periodontal Diseases - A Clinician's Guide

Periodontal Diseases - A Clinician's Guide

Systemic Sclerosis - An Update on the Aberrant Immune System and Clinical Features

Systemic Sclerosis - An Update on the Aberrant Immune System and Clinical Features

Dyslipidemia - From Prevention to Treatment

Dyslipidemia - From Prevention to Treatment

Front Lines of Thoracic Surgery

Front Lines of Thoracic Surgery

Quality of Service and Resource Allocation in WiMAX

Quality of Service and Resource Allocation in WiMAX

Micromachining Techniques for Fabrication of Micro and Nano Structures

Micromachining Techniques for Fabrication of Micro and Nano Structures

Breast Reconstruction - Current Techniques

Breast Reconstruction - Current Techniques

Sonography

Sonography

Advancements in Tumor Immunotherapy and Cancer Vaccines

Advancements in Tumor Immunotherapy and Cancer Vaccines

Global Navigation Satellite Systems: Signal, Theory and Applications

Global Navigation Satellite Systems: Signal, Theory and Applications

Earth Sciences

Earth Sciences

Electrophysiology - From Plants to Heart

Electrophysiology - From Plants to Heart

Emerging Research and Treatments in Renal Cell Carcinoma

Emerging Research and Treatments in Renal Cell Carcinoma

Ecotoxicology

Ecotoxicology

Squamous Cell Carcinoma

Squamous Cell Carcinoma

Liver Tumors

Liver Tumors

Methodologies, Tools and New Developments for E-Learning

Methodologies, Tools and New Developments for E-Learning

Experimental Autoimmune Encephalomyelitis - Models, Disease Biology and Experimental Therapy

Experimental Autoimmune Encephalomyelitis - Models, Disease Biology and Experimental Therapy

Xenotransplantation

Xenotransplantation

Environmental Health - Emerging Issues and Practice

Environmental Health - Emerging Issues and Practice

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